Publications
Overview of our Journal and Conference Papers:
Listed by year
2026
Distinguishing self from non-self RNA by editing-specific inosine patterns. / Varada, Rajagopal; Leuchtenberger, Alina F.; Vesely, Cornelia et al.
In: Nucleic Acids Research, Vol. 54, No. 16, gkag845, 09.09.2026.
Publications: Contribution to journal › Article › Peer Reviewed
Computational Analysis of Sequence Editability in the Theophylline RNA Aptamer as a Functional RNA Module. / Aman, Aamir; Sidl, Leonhard; Darai, Nitchakan et al.
In: International Journal of Molecular Sciences, Vol. 27, No. 16, 7228, 08.2026.
Publications: Contribution to journal › Article › Peer Reviewed
Identification of conserved RNA regulatory switches in living cells using RNA secondary structure ensemble mapping and covariation analysis. / Borovská, Ivana; Zhang, Chundan; Dülk, Sarah Luisa J. et al.
In: Nature Biotechnology, Vol. 44, No. 6, 06.2026, p. 989-1001.
Publications: Contribution to journal › Article › Peer Reviewed
Rational design of mechanically active RNAs: de novo engineering of functional exoribonuclease-resistant RNAs. / Sidl, Leonhard (Corresponding author); Walter, Jule; Gutenbrunner, Katrin et al.
In: Nucleic Acids Research, Vol. 54, No. 9, gkag473, 22.05.2026.
Publications: Contribution to journal › Article › Peer Reviewed
MicroRNA-Mediated Obstruction of Stem-loop Alternative Splicing (MIMOSAS) regulates long-range alternative splicing in Drosophila. / Ruan, Kai; Liu, Jiaqi; Xia, Melanie et al.
In: Nucleic Acids Research, Vol. 54, No. 7, gkag356, 24.04.2026.
Publications: Contribution to journal › Article › Peer Reviewed
On the trade-off between expressivity and privacy in graph representation learning. / Indri, Patrick; Drucks, Tamara; Gärtner, Thomas.
2026. Paper presented at ICLR 2026, Rio de Janeiro, Brazil.
Publications: Contribution to conference › Paper › Peer Reviewed
2025
Cell-type-specific requirement for TYK2 in murine immune cells under steady state and challenged conditions. / Karjalainen, Anzhelika; Witalisz-Siepracka, Agnieszka; Prchal-Murphy, Michaela et al.
In: Cellular and Molecular Life Sciences, Vol. 82, No. 1, 98, 12.2025.
Publications: Contribution to journal › Article › Peer Reviewed
Transit functions and pyramid-like binary clustering systems (vol 357, pg 365, 2024). / Changat, Manoj; Shanavas, Ameera Vaheeda; Stadler, Peter F. (Corresponding author).
In: Discrete Applied Mathematics, Vol. 371, 15.08.2025, p. 280.
Publications: Contribution to journal › Correction › Peer Reviewed
From structure to function: Computational insights into Musashi-RNA complexes in the context of viral pathogenesis and beyond. / Darai, Nitchakan; Sidl, Leonhard; Rungrotmongkol, Thanyada et al.
In: ScienceAsia, Vol. 51S, No. 1, 2025s013, 05.2025.
Publications: Contribution to journal › Review › Peer Reviewed
Computational complexity, algorithmic scope, and evolution. / Sidl, Leonhard; Faissner, Maximilian; Uhlir, Manuel et al.
In: Journal of Physics: Complexity, Vol. 6, No. 1, 015013, 01.03.2025.
Publications: Contribution to journal › Article › Peer Reviewed